Clarke, J.M., 1925. A Natural Seismograph. Science 61, 391-392.

Clarke, J.M., 1924. A Colossal Devonian Glass Sponge, in: Clarke, J.M. (Ed.), Eighteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 121-122.

Clarke, J.M., 1924. A Hemiasdian Crustacean from New York Silurian Waterlimes, in: Clarke, J.M. (Ed.), Eighteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 119-120.

Clarke, J.M., 1924. Rosetted Trails of the Paleozoic, in: Clarke, J.M. (Ed.), Eighteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 128-129.

Clarke, J.M., 1922. The Age of the Earth from the Paleontological Viewpoint. Proceedings of the American Philosophical Society 61, 272-282.

Clarke, J.M., 1921. The Oldest of the Forests. The Scientific Monthly 12, 83-91.

Clarke, J.M., 1919. Armstrongia: A New Genus of Devonian Glass Sponges, in: Clarke, J.M. (Ed.), Fifthteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 143-146.

Clarke, J.M., 1919. The Death of Lady Allardyce. Science 50, 585.

Clarke, J.M., Ali, A.E.-F., 1919. An Elephant with Four Tusks. Science 50, 395-396.

Clarke, J.M., 1919. The Microscopic Fauna of the Bonaventure Conglomerate, in: Clarke, J.M. (Ed.), Fifthteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 147-148.

Clarke, J.M., 1919. New Paleozoic Crustaceans, in: Clarke, J.M. (Ed.), Fifthteenth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 129-142.

Clarke, J.M., 1919. Organic Dependence and Disease: Their Origin and Significance, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1918. Possible Derivation of the Lepadid Barnacles from the Phyllopods. Proceedings of the National Academy of Sciences 4, 384-386.

Clarke, J.M., 1917. Contributions to the Paleontology of New York Devonian Glass Sponges, in: Clarke, J.M. (Ed.), Thirtieth Report Of The Director Of The State Museum Science Department. The University of the State of New York, Albany, New York, pp. 177-198.

Clarke, J.M., 1917. The Philosophy of Geology and the Order of the State. Science 45, 125-135.

Clarke, J.M., 1917. A Relief Map of the United States. Science 45, 291.

Clarke, J.M., 1916. The Reincarnation of James Eights, Antarctic Explorer. The Scientific Monthly 2, 189-202.

Clarke, J.M., 1915. A New Glacial Park. Science 41, 382-383.

Clarke, J.M., 1914. The Eastman-Zittell Paleontology. Science 39, 723-725.

Clarke, J.M., 1914. A Fossil Botanical Garden. Science 40, 884.

Clarke, J.M., 1914. The Indian Ladder Reservation. Science 39, 418.

Clarke, J.M., 1913. Cambrian Brachiopoda. Science 37, 488-491.

Clarke, J.M., 1913. Illustrations of the Devonic Fossils of Southern Brazil and the Faukland Islands, in: Clarke, J.M. (Ed.), Ninth Report Of The Director Of The Science Division. The University of the State of New York, Albany, New York, pp. 140-210.

Clarke, J.M., 1913. The Maryland Devonian Books. Science 38, 742-745.

Clarke, J.M., 1913. A Notable Trilobite from Perce Rock, in: Clarke, J.M. (Ed.), Ninth Report Of The Director Of The Science Division. The University of the State of New York, Albany, New York, pp. 138-139.

Clarke, J.M., Ruedemann, R., 1912. The Eurypterida of New York. v. 1. and v. 2, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., 1911. The Paleontological Society Address of the President. Science 33, 284-296.

Clarke, J.M., 1909. Early Devonic History of New York and Eastern North America. Part II, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., 1909. The Protection of Natural Monuments. Science 30, 51-52.

Clarke, J.M., 1908. The Beginings of Dependent Life, in: Clarke, J.M. (Ed.), Fourth Report Of The Director Of The Science Division. The University of the State of New York, Albany, New York, pp. 146-169.

Clarke, J.M., 1908. Early Devonic History of New York and Eastern North America; Part I, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., Luther, D.D., 1908. Geological Maps and Descriptions of the Portage and Nunda Quadrangles, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., Peck, C.H., 1906. Report of the State Botanist 1905, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1905. Catalogue of Type Specimens of Paleozoic Fossils in New York State Museum, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., Luther, D.D., 1905. Geologic Map of the Tully Quadrangle, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., Luther, D.D., 1905. Geology of the Watkins and Elmira Quadrangles Accompanied by a Geologic Map, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1905. Pierce: A Brief Sketch of its Geology, in: Clarke, J.M. (Ed.), Report Of The State Paleontologist 1903. The University of the State of New York, Albany, New York, pp. 134-172.

Clarke, J.M., Peck, C.H., 1905. Report of the State Botanist 1904, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1905. Report of the State Paleontologist 1903, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1904. Naples Fauna in western New York, Part II, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., Luther, D.D., 1904. Stratigraphic and Paleontologic map of Canandaigua and Naples quadrangles, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1903. Catalogue of Type Specimens of Paleozoic Fossils in New York State Museum, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1903. Construction of the Olean Hock Section, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1902. The University of the State of New York, Albany, New York, pp. 996-999.

Clarke, J.M., Ruedemann, R., 1903. Guelph Fauna in the State of New York, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., 1903. Mastodons of New York, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1902. The University of the State of New York, Albany, New York, pp. 934-958.

Clarke, J.M., 1903. Some Devonic Works, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1902. The University of the State of New York, Albany, New York, pp. 1231-1238.

Clarke, J.M., Ruedemann, R., Luther, D.D., 1902. Contact Lines of Upper Siluric Formations on the Brockport and Medina Quadrangles, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1901. The University of the State of New York, Albany, New York, pp. 517-523.

Clarke, J.M., 1902. Dictyonine Hexactinellid Sponges from the Upper Devonic of New York. New York State Museum Annual Report 54, 187-190.

Clarke, J.M., 1902. Indigene and Alien Faunas of the New York Devonic, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1901. The University of the State of New York, Albany, New York, pp. 664-684.

Clarke, J.M., 1902. A New Genus of Paleozoic Brachiopods, Eunoa, with Considerations on Discinocaris, Spathlocaris and Cardlocaris. New York State Museum Bulletin 52, 606-615.

Clarke, J.M., 1902. Notes of Paleozoic Crustaceans. New York State Museum Annual Report 54, 83-119.

Clarke, J.M., 1902. The Onondaga Lake Squids. Science 16, 991.

Clarke, J.M., 1902. Paleontologic Results of the Areal Survey of the Olean Quadrangle, in: Merrill, J.H., Clarke, J.M. (Eds.), Report Of The State Paleontologist 1901. The University of the State of New York, Albany, New York, pp. 524-528.

Clarke, J.M., 1902. Paropsonema cryptophya: A Peculiar Echinoderm from the Intumescens-zone (Portage Beds) of Western New York. New York State Museum Annual Report 54, 172-178.

Clarke, J.M., 1902. Preliminary Statement of the Paleontologic Results of the Areal Survey of the Olean Quadrangle. New York State Museum Bulletin 52, 524-528.

Clarke, J.M., 1902. A Remarkable Occurrence of Orthoceras in the Oneota Beds of the Chenango Valley, N.Y.. New York State Museum Annual Report 54, 167-171.

Clarke, J.M., 1902. The Squids from Onondaga Lake, N.Y.. Science 16, 947-948.

Clarke, J.M., 1902. The Water Biscuit of Squaw Island, Canandaigua Lake, N.Y.. New York State Museum Annual Report 54, 195-198.

Clarke, J.M., 1901. Amnigenia as an Indicator of Freshwater Deposits during the Devonic of New York, Ireland and the Rhineland, in: Merrill, J.H., Clarke, J.M. (Eds.), Paleontologic Papers 2. The University of the State of New York, Albany, New York, pp. 199-204.

Clarke, J.M., 1901. Marcellus Limestones of Central and Western New York and Their Fauna, in: Merrill, J.H., Clarke, J.M. (Eds.), Paleontologic Papers 2. The University of the State of New York, Albany, New York, pp. 115-138.

Clarke, J.M., 1901. The Maryland Eocene Book. Science 14, 27.

Clarke, J.M., 1901. New Agelacrinites, in: Merrill, J.H., Clarke, J.M. (Eds.), Paleontologic Papers 2. The University of the State of New York, Albany, New York, pp. 182-198.

Clarke, J.M., 1901. Relation of New York State Paleontology to the Schools and Colleges.. Regents Report 113, 359-364.

Clarke, J.M., 1901. Value of Amnigenin as an Indicator of Freshwater Deposits During the Devonic of New York, Ireland, and the Rhineland. New York State Museum Bulletin 49, 199-203.

Clarke, J.M., 1900. Dictyonine hexactineIIid sponges from the Upper Devonic of New York, in: Clarke, J.M. (Ed.), Paleontologic Papers. The University of the State of New York, Albany, New York, pp. 187-194.

Clarke, J.M., 1900. Note on the Siluro-Devonic Boundary. Science 12, 406-408.

Clarke, J.M., 1900. The Oriskany Fauna of Becraft Mountain, Columbia County, New York, New York State Museum Memoir. The University of the State of New York, Albany, New York.

Clarke, J.M., 1900. Paleontologic Papers, New York State Museum Bulletin. The University of the State of New York, Albany, New York.

Clarke, J.M., 1900. Paropsonema cryptophya: a Peculiar Echinoderm from the Intumescenszone (Portage Beds) of Western New York, in: Clarke, J.M. (Ed.), Paleontologic Papers. The University of the State of New York, Albany, New York, pp. 172-186.

Clarke, J.M., 1900. A Remarkable Occurrence of Orthoceris in the Oneonta Beds of the Chenango Valley, in: Clarke, J.M. (Ed.), Paleontologic Papers. The University of the State of New York, Albany, New York, pp. 167-171.

Clarke, J.M., 1900. The Water Biscuit of Squaw Island, Canandaigua Lake, N. Y., in: Clarke, J.M. (Ed.), Paleontologic Papers. The University of the State of New York, Albany, New York, pp. 195-198.

Clarke, J.M., 1899. Geological Time. Science 10, 695.

Clarke, J.M., 1899. Guide to Excursions in the Fossiliferous Rocks of New York State, University Handbook. The University of the State of New York, Albany, NY.

Clarke, J.M., 1899. The Naples Fauna (Fauna with Mantlicoceras Intumescens) in Western New York. New York State Museum Annual Report 50, 29-161.

Clarke, J.M., Schuchert, C., 1899. The Nomenclature of the New York Series of Geological Formations. Science 10, 874-878.

Clarke, J.M., 1899. Notes on the Early Stages of Certain Goniatites. New York State Museum Annual Report 50, 163-169.

Clarke, J.M., 1899. Paleontology, University Handbook. The University of the State of New York, Albany, New York.

Clarke, J.M., 1898. Notes on Some Crustaceans from the Chemung Group of New York. New York State Museum Annual Report 49, 729-738.

Clarke, J.M., 1898. Stratigraphic and Faunal Relations of the Oneonta Sandstones and Shales, the Ithaca and Portage Groups in Central New York. New York State Museum Annual Report 49, 11-12, 27-81.

Clarke, J.M., Hall, J., 1895. New Species of Brachiopoda Described in Paleontology of New York, v.8, pt1 and 2. New York State Museum Annual Report 48, 16-18, 323-372.

Clarke, J.M., 1894. Evolution of the Genera of the Palaeozoic Brachiopoda. New York State Museum Annual Report 47, 803-840.

Clarke, J.M., 1894. List of Publications Relating to the Geology and Paleontology of the State of New York. New York State Museum Annual Report 47, 753-791.

Clarke, J.M., 1894. New or Rare Species of Fossils from the Horizons of the Livonian Salt Shaft. New York State Museum Annual Report 47, 353-383.

Clarke, J.M., 1894. Report on Field -work in Chenango County. New York State Museum Annual Report 47, 723-751.

Clarke, J.M., 1894. Succession of the Fossil Faunas in the Section of the Levonia Salt Shaft. New York State Museum Annual Report 47, 325-352.

Clarke, J.M., 1893. On the Structure of the Carapace in the Devonian Crustacean Rhinocaris; and the Relation of the Genus to Mesothyra and the Phyllocarida. The American Naturalist 27, 793-801.

Clarke, J.M., 1892. Catalogue of the Collection of Geological and Paleontological Specimens Donated by the Albany Institute to the State Museum. New York State Museum Annual Report 45, 347-369.

Clarke, J.M., 1892. On Cordania, a Proposerd New Genus of Trilobites. New York State Museum Annual Report 45, 440-443.

Clarke, J.M., 1892. Coronura aspectans. New York State Museum Annual Report 44, 105-109.

Clarke, J.M., 1892. Genera or the Palaeozoic Brachiopoda. New York State Museum Annual Report 44, 45-48.

Clarke, J.M., 1892. Genus Acidaspis. New York State Museum Annual Report 44, 91-101.

Clarke, J.M., 1892. List of Original and Illustrated Specimens in the Paleontological Collections, Pt. 1, Crustacea. New York State Museum Annual Report 45, 373-437.

Clarke, J.M., 1892. Observations on the Terataspisgrandis, Hall, the Largest Known Trilobite. New York State Museum Annual Report 44, 111-114.

Clarke, J.M., 1892. Terataspis grandis. New York State Museum Annual Report 44, 111-114.

Clarke, J.M., 1889. Genera of the Paleozoic Brachiopoda. New York State Museum Annual Report 42, 389-393.

Clarke, J.M., 1889. The Genus Bronteus in the Chemung Rocks of New York. New York State Museum Annual Report 42, 403-405.

Clarke, J.M., 1889. The Hercynian Question: A Brief Review of its Development and Present Status, with a Few Remarks upon its Relation to the Current Classification of American Palaeozoic Faunas. New York State Museum Annual Report 42, 408-437.

Clarke, J.M., 1889. List of the Species Constituting the Known Fauna and Flora of the Marcellus Epoch in the State of New York. New York State Museum Annual Report 42, 406-407.

Clarke, J.M., 1889. List of the Type Specimens of Devonian Crustacea Described in Paleontology of New York, v.7 in the New York State Museum. New York State Museum Annual Report 42, 370-373.

Clarke, J.M., 1888. Report on the Bones of Mastodon or Elephase Found Associated with Charcoal and Pottery at Attica, N.Y.. New York State Museum Annual Report 41, 388-390.

Clarke, J.M., 1888. The Structure and Development of the Visual Area in the Trilobite, Phacopsrana, Green. Journal of Morphology 2, 253-270.