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Stoner, D., 1941. Feeding Behavior of a Water Snake. Science 94, 367. doi:10.1126/science.94.2442.367
Stoner, D., 1938. The English Sparrow and Highway Mortality. The Wilson Bulletin 50, 63-64.
Stoner, D., 1937. The House Rat as an Enemy of the Bank Swallow. Journal of Mammalogy 18, 87-89. doi:10.2307/1374317
Stoner, D., 1950. Extant New York State Specimens of the Adirondack Cougar, New York State Museum Circular. The University of the State of New York, Albany, New York.
Stoner, D., 1942. Behavior of Young Bank Swallows after First Leaving the Nest. Bird-Banding 13, 107-110. doi:10.2307/4509745
Stoner, D., 1935. Ninety Minutes with Robert Ridgway. Wison Bulletin 46, 90-92.
Stoner, D., 1941. A Noteworthy Concentration of Birds. The Auk 58, 588-589. doi:10.2307/4078670
Stoner, D., 1944. The Snowy Owl in New York State: 1942-1943. The Auk 61, 656-657. doi:10.2307/4080211
Stoner, D.H., 1933. Superstitions and Facts about Kingfishers. University of the State of New York Bulletin to the Schools 19, 165-167.
Stoner, D., 1938. The Fisher is a Foe of the Porcupine in New York State. Journal of Mammalogy 19, 373-374.
Stoner, D., 1937. Three Returns of a Bank Swallow. Science 86, 469-470. doi:10.1126/science.86.2238.469
Stoner, D., Stoner, L.C., 1942. A Seven-Year-Old Bank Swallow. Science 96, 273-274. doi:10.1126/science.96.2490.273
Stoner, D., 1939. Remarks on the Abundance and Range of the Opossum. Journal of Mammalogy 20, 250-251. doi:10.2307/1374387
Stoner, D., 1945. Temperature and Growth Studies of the Northern Cliff Swallow. The Auk 62, 207-216. doi:10.2307/4079698
Stoner, D., 1938. Longevity in the Bank Swallow. Bird-Banding 9, 173-177.
Stoner, D., 1937. Historical Outline of the Zoological Work of the State Museum, in: New York State Museum Bulletin. pp. 101-105.

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